iHARP Research Toolkit Portal

Python Packages

Explore and discover Python packages on the PyPI Index to support reproducible scientific workflows. iHARP shares its source code on the GitHub platform as well as its models and datasets on the Zenodo platform.

PINNICLE

v1.0.6
PyPI

A Python library for solving ice sheet modeling problems using Physics Informed Neural Networks

python -m pip install PINNICLE
License
LGPL-2.1
Python
>=3.9
Dependencies (9)
  • deepxde
  • mat73
  • matplotlib
  • netCDF4==1.7.2
  • h5py==3.14.0
  • numpy
  • pandas
  • scikit-learn
  • scipy
Bug Tracker Documentation Homepage

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cmad

v0.1.0.post6
PyPI

CMAD: A Lightweight Framework for Extreme Spatio-Temporal Anomaly Detection

python -m pip install cmad
License
iHARP
Authors
Maloy Kumar Devnath, Sudip Chakraborty, Vandana P. Janeja
Python
>=3.8
Key features
  • ✔ Unsupervised (no training labels required)
  • ✔ Works with **images or generic 2D time-series arrays**
  • ✔ Supports arbitrary spatial dimensions (no fixed size)
  • ✔ Adaptive IQR-based thresholding
  • ✔ Binary anomaly masks (`1 = anomaly, 0 = normal`)
  • ✔ CPU-only by default (GPU-ready via PyTorch)
  • ✔ Suitable for large spatio-temporal datasets
Dependencies (4)
  • numpy
  • torch
  • opencv-python
  • matplotlib
Homepage Issues Paper Source

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spatial-link

v0.1.0.post3
PyPI

Spatial-Link: A framework for detecting statistically significant linkages from spatio-temporal data.

python -m pip install spatial-link
License
iHARP
Authors
Maloy Kumar Devnath, Sudip Chakraborty, Vandana P. Janeja
Python
>=3.9
Dependencies (2)
  • numpy
  • networkx
Homepage Issues Repository

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causalnn

v0.1
PyPI

CausalNN package is the implementation of the TS-CausalNN causal discovery method for time series data.

python -m pip install causalnn
License
Not declared
Authors
Omar Faruque and Jianwu Wang

View on PyPI

PyPI

Python tools for validating research claims against scientific literature.

python -m pip install research-claim-validator
License
Not declared
Authors
Tolulope Ale
Python
>=3.10
Dependencies (109)
  • anthropic>=0.18.0; extra == "llm"
  • openai>=1.12.0; extra == "llm"
  • pydantic>=2.4.0; extra == "llm"
  • pydantic-settings>=2.0.0; extra == "llm"
  • prometheus-client>=0.19.0; extra == "llm"
  • python-dotenv>=1.0.0; extra == "llm"
  • tenacity>=8.2.3; extra == "llm"
  • arxiv>=2.1.0; extra == "retrieval"
  • Deprecated>=1.2.13; extra == "retrieval"
  • einops>=0.7.0; extra == "retrieval"
  • faiss-cpu>=1.7.4; extra == "retrieval"
  • httpx>=0.24.0; extra == "retrieval"
  • langgraph>=0.0.20; extra == "retrieval"
  • neo4j>=5.14.0; extra == "retrieval"
  • numpy>=1.24.0; extra == "retrieval"
  • pandas>=2.0.0; extra == "retrieval"
  • pypdf>=6.6.2; extra == "retrieval"
  • requests>=2.31.0; extra == "retrieval"
  • sentence-transformers>=2.2.0; extra == "retrieval"
  • spacy>=3.7.0; extra == "retrieval"
  • structlog>=24.1.0; extra == "retrieval"
  • torch>=2.0.0; extra == "retrieval"
  • tqdm>=4.65.0; extra == "retrieval"
  • aiofiles>=23.0.0; extra == "corpus"
  • anthropic>=0.18.0; extra == "corpus"
  • arxiv>=2.1.0; extra == "corpus"
  • Deprecated>=1.2.13; extra == "corpus"
  • einops>=0.7.0; extra == "corpus"
  • faiss-cpu>=1.7.4; extra == "corpus"
  • httpx>=0.24.0; extra == "corpus"
  • langgraph>=0.0.20; extra == "corpus"
  • neo4j>=5.14.0; extra == "corpus"
  • numpy>=1.24.0; extra == "corpus"
  • openai>=1.12.0; extra == "corpus"
  • pandas>=2.0.0; extra == "corpus"
  • prometheus-client>=0.19.0; extra == "corpus"
  • pydantic>=2.4.0; extra == "corpus"
  • pydantic-settings>=2.0.0; extra == "corpus"
  • pypdf>=6.6.2; extra == "corpus"
  • python-dotenv>=1.0.0; extra == "corpus"
  • requests>=2.31.0; extra == "corpus"
  • sentence-transformers>=2.2.0; extra == "corpus"
  • spacy>=3.7.0; extra == "corpus"
  • structlog>=24.1.0; extra == "corpus"
  • tenacity>=8.2.3; extra == "corpus"
  • torch>=2.0.0; extra == "corpus"
  • tqdm>=4.65.0; extra == "corpus"
  • aiofiles>=23.0.0; extra == "api"
  • fastapi>=0.104.0; extra == "api"
  • opentelemetry-api>=1.22.0; extra == "api"
  • opentelemetry-exporter-otlp>=1.22.0; extra == "api"
  • opentelemetry-instrumentation-fastapi>=0.43b0; extra == "api"
  • opentelemetry-sdk>=1.22.0; extra == "api"
  • prometheus-client>=0.19.0; extra == "api"
  • python-multipart>=0.0.6; extra == "api"
  • sse-starlette>=1.8.2; extra == "api"
  • uvicorn[standard]>=0.24.0; extra == "api"
  • pandas>=2.0.0; extra == "ui"
  • sseclient-py>=1.8.0; extra == "ui"
  • streamlit>=1.30.0; extra == "ui"
  • aiofiles>=23.0.0; extra == "full"
  • anthropic>=0.18.0; extra == "full"
  • arxiv>=2.1.0; extra == "full"
  • Deprecated>=1.2.13; extra == "full"
  • einops>=0.7.0; extra == "full"
  • faiss-cpu>=1.7.4; extra == "full"
  • fastapi>=0.104.0; extra == "full"
  • httpx>=0.24.0; extra == "full"
  • langgraph>=0.0.20; extra == "full"
  • neo4j>=5.14.0; extra == "full"
  • numpy>=1.24.0; extra == "full"
  • openai>=1.12.0; extra == "full"
  • opentelemetry-api>=1.22.0; extra == "full"
  • opentelemetry-exporter-otlp>=1.22.0; extra == "full"
  • opentelemetry-instrumentation-fastapi>=0.43b0; extra == "full"
  • opentelemetry-sdk>=1.22.0; extra == "full"
  • pandas>=2.0.0; extra == "full"
  • prometheus-client>=0.19.0; extra == "full"
  • pydantic>=2.4.0; extra == "full"
  • pydantic-settings>=2.0.0; extra == "full"
  • pypdf>=6.6.2; extra == "full"
  • python-dotenv>=1.0.0; extra == "full"
  • python-multipart>=0.0.6; extra == "full"
  • requests>=2.31.0; extra == "full"
  • sentence-transformers>=2.2.0; extra == "full"
  • spacy>=3.7.0; extra == "full"
  • sse-starlette>=1.8.2; extra == "full"
  • sseclient-py>=1.8.0; extra == "full"
  • streamlit>=1.30.0; extra == "full"
  • structlog>=24.1.0; extra == "full"
  • tenacity>=8.2.3; extra == "full"
  • torch>=2.0.0; extra == "full"
  • tqdm>=4.65.0; extra == "full"
  • uvicorn[standard]>=0.24.0; extra == "full"
  • black>=23.12.1; extra == "dev"
  • build>=1.0.0; extra == "dev"
  • flake8>=7.0.0; extra == "dev"
  • ipython>=8.20.0; extra == "dev"
  • mypy>=1.8.0; extra == "dev"
  • pytest>=7.4.3; extra == "dev"
  • pytest-asyncio>=0.23.3; extra == "dev"
  • pytest-cov>=4.1.0; extra == "dev"
  • pytest-mock>=3.12.0; extra == "dev"
  • responses>=0.24.1; extra == "dev"
  • twine>=5.0.0; extra == "dev"
  • wheel>=0.42.0; extra == "dev"
  • datasets>=2.16.0; extra == "notebooks"
  • ipykernel>=6.25.0; extra == "notebooks"
  • ipywidgets>=8.1.0; extra == "notebooks"

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PyPI

Construct interpretable macro-neighborhoods from spatial data using adjacency-aware regional aggregation.

python -m pip install macroneighborhoods
License
MIT
Authors
Chhaya Kulkarni
Python
>=3.10
Dependencies (11)
  • pandas
  • numpy
  • geopandas
  • shapely
  • scipy
  • libpysal
  • esda
  • geovoronoi
  • pyarrow
  • matplotlib
  • contextily

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icepatchnet

v0.1.0
PyPI

Ice-PatchNet: A patch (segmented images) based CNN workflow

python -m pip install icepatchnet
License
iHARP
Authors
Sai Vikas Amaraneni, Maloy Kumar Devnath, Shalini Srinivasa, Chhaya Kulkarni, Sudip Chakraborty, Vandana P. Janeja
Python
>=3.8
Dependencies (5)
  • numpy
  • torch
  • opencv-python
  • matplotlib
  • tqdm
Homepage Issues Source

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rictsc

v0.1.3
PyPI

Causal Time Series Modeling of Supraglacial Lake Evolution in Greenland under Distribution Shift

python -m pip install rictsc
License
GPL
Authors
Emam Hossain, Muhammad Hasan Ferdous, Devon Dunmire, Aneesh Subramanian, Md Osman Gani
Python
>=3.11
Dependencies (10)
  • numpy==1.26.4
  • pandas==2.2.3
  • scikit-learn==1.5.1
  • sktime==0.37.0
  • tigramite==5.2.7.0
  • xarray
  • geopandas
  • matplotlib
  • scipy
  • netcdf4
Bug Tracker Homepage Source

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xcheck

v0.1.2
PyPI

Python package for 'XCheck: A Consistency-based validation framework of englacial layers annotations' across consecutive and intersecting radargram pairs using dot-product similarity.

python -m pip install xcheck
License
MIT
Authors
Muhammad Behroze Hassan, Bayu Adhi Tama, Sanjay Purushotham, Vandana P. Janeja
Python
>=3.8
Dependencies (5)
  • numpy
  • matplotlib
  • scipy
  • pandas
  • cartopy
Paper

View on PyPI